umn logo IMA home |  Contact IMA 
IMA Web

IMA Annual Program Year Workshop

Chemical Dynamics: Challenges and Approaches

January 12-16, 2009
Organizers:
Peter Deuflhard Zuse Institute Berlin (ZIB) and Freie Universität Berlin
Sharon Hammes-Schiffer Chemistry, The Pennsylvania State University
William L. Hase Chemistry and Biochemistry, Texas Tech University
Christian Lubich Mathematisches Institut, Universität Tübingen
Maurizio Persico Chimica e Chimica Industriale, Università di Pisa

Schedule Participants Program Application Feedback
IMA Live Streaming and Webcasting Photo Gallery Maps
Abstracts and Talk Materials Dining Guide
Tutorial: Fundamentals of Chemical Dynamics Simulations, January 11, 2009

Description:

Chemical dynamics as understood here refers broadly to both equilibrium and nonequilibrium dynamics of chemical reactions in the gas phase and in condensed phases. The challenges in this field encompass the description of complex many-atom reactions, photochemical reactions, quantum dynamics, tunneling, coupled surfaces, hyperthermal dynamics, and polymer materials. The workshop will address this broad spectrum of challenges by covering both computational frontiers and novel methods. In applications, simulation of experimental transients and the coupling of relaxation to reactive dynamics represent critical challenges. In method development, key objectives are the efficient generation of potential energy surfaces as well as the coupling of conformation dynamics with electronic structure theory or quantum dynamical models. Methods that will be covered in this workshop include "on-the-fly" dynamics, nonadiabatic dynamics, mixed quantum/classical molecular dynamics, and quantum mechanical/molecular mechanical (QM/MM) potential energy surfaces. Further topics include parametrization of electronic structure theories, the coupling of semiempirical and ab initio methods, and model reduction techniques.

The workshop will combine talks of both established experts in the field and promising young researchers.

Schedule
Monday | Tuesday | Wednesday | Thursday | Friday
  Monday, January 12
Morning Session Topic – "Integrating Trajectories and Interpolating
Potential Energy Surfaces for Direct Dynamics Simulations"
Chair – William L. Hase (Texas Tech University)

Afternoon Session Topic – "Quantum Dynamics"
Chair – Stephen Wiggins (University of Bristol)

8:00am-8:45am Registration and coffee   EE/CS 3-176
8:45am-9:00am Welcome to the IMA Fadil Santosa (University of Minnesota) EE/CS 3-180
9:00am-9:45am Overview talk on potential energy surfaces Joel M. Bowman (Emory University) EE/CS 3-180
9:45am-10:00am Discussion   EE/CS 3-180
10:00am-10:30am Fourier grid QM/MM simulations of the hydrated electron John M. Herbert (Ohio State University) EE/CS 3-180
10:30am-10:40am Discussion   EE/CS 3-180
10:40am-11:10am Coffee   EE/CS 3-176
11:10am-11:40am Automatic construction of ab initio potential energy surfaces Donald L. Thompson (University of Missouri) EE/CS 3-180
11:40am-11:50pm Discussion   EE/CS 3-180
11:50am-12:30pm Concluding discussion Bill Poirier (Texas Tech University) EE/CS 3-180
12:30pm-2:00pm Lunch    
2:00pm-2:45pm Using Diffusion Monte Carlo to investigate molecules that undergo large amplitude vibrational motions Anne B. McCoy (Ohio State University) EE/CS 3-180
2:45pm-3:00pm Discussion   EE/CS 3-180
3:00pm-3:30pm Bohmian mechanics with complex action: An exact formulation of quantum mechanics with complex trajectories David J. Tannor (Weizmann Institute of Science) EE/CS 3-180
3:30pm-3:40pm Discussion   EE/CS 3-180
3:40pm-3:50pm Group Photo    
3:50pm-4:20pm Coffee   EE/CS 3-176
4:20pm-4:50pm Geometric integrators for the Schrödinger equation: Splitting and Magnus integrators Sergio Blanes (Polytechnical University of Valencia) EE/CS 3-180
4:50pm-5:00pm Discussion   EE/CS 3-180
5:00pm-5:30pm A fast path integral method for liquid water David E. Manolopoulos (University of Oxford) EE/CS 3-180
5:30pm-5:40pm Discussion   EE/CS 3-180
5:40pm-7:00pm Reception and Poster Session
Poster submissions welcome from all participants
Lind Hall 400
Coherent and optimal control of adiabatic motion of ions in a trap Dmitri Babikov (Marquette University)
Analysis of structured populations in aquaculture József Z. Farkas (University of Stirling)
Tunneling dynamics in a double well within the approximate quantum trajectories framework Sophya Garashchuk (University of South Carolina)
Quantum transition state theory applied to collinear reactions Arseni Goussev (University of Bristol)
Roman Schubert (University of Bristol)
Non–adiabatic scattering wave functions in a simple Born–Oppenheimer model George A. Hagedorn (Virginia Polytechnic Institute and State University)
Born-Oppenheimer corrections near a Renner-Teller intersection Mark S. Herman (University of Minnesota)
Mechanistic simulation of the autocatalytic isopeptide bond formation in pili with QM/MM minimum free energy path method Xiangqian Hu (Duke University)
Solvation dynamics in supercritical fluoroform Francesca Ingrosso (Université de Nancy I (Henri Poincaré))
A self-consistent, polarizable, electron-water potential for use in hydrated-electron simulations Leif David Jacobson (Ohio State University)
Many-body theory of surface-enhanced Raman scattering David J. Masiello (Northwestern University)
Partial differential equations in chemical dynamics with finite elements Craig Michoski (University of Texas)
Memory, hysteresis and oscillation induced by multiple covalent modifications and its application to circadian rhythm of Cyanobacteria Isamu Onishi (Hiroshima University)
Azobenzene in solution: excited state dynamics simulation Maurizio Persico (Università di Pisa)
A model for the photo-orientation of a molecular sample irradiated with polarized light Maurizio Persico (Università di Pisa)
Symmetry-broken independent-particle models in Born-Oppenheimer molecular dynamics of chemical bond dissociation Igor V. Schweigert (Naval Research Laboratory)
A quantum chemist’s view of molecular conduction via the reduced density matrix Joseph Eli Subotnik (Tel Aviv University)
Infrared spectroscopy and dynamics of the Zundel cation Oriol Vendrell-Romagosa (Ruprecht-Karls-Universität Heidelberg)
Improved united-atom models for perfluorinated self-assembled monolayers Saulo A. Vázquez (University of Santiago de Compostela)
Calculating solution redox free energies with Ab initio QM/MM minimum free energy path method Xiancheng Zeng (Duke University)
  Tuesday, January 13
Morning Session Topic - "Quantum Dynamics"
Chair – Reinhard Schinke (Max-Planck-Institut für Dynamik und Selbstorganisation)

Afternoon Session Topic – "Conformational Dynamics, Reaction Paths, Transition States, and Rare Events for Complex Many-Atom Systems"
Chair – Christian Lubich (Universität Tübingen)

8:00am-8:30am Coffee   EE/CS 3-176
8:30am-9:00am Quantum dynamics of complex-forming reactions Hua Guo (University of New Mexico) EE/CS 3-180
9:00am-9:10am Discussion   EE/CS 3-180
9:10am-9:40am Quantum molecular dynamics of complex systems studied with MCTDH: Dynamics and IR-spectroscopy of the protonated water dimer H5O2+ and its isotopologues Hans-Dieter Meyer (Ruprecht-Karls-Universität Heidelberg) EE/CS 3-180
9:40am-9:50am Discussion   EE/CS 3-180
9:50am-10:40am Coffee   EE/CS 3-176
10:40am-11:10am Reduced vs. full system-bath quantum dynamics: Vibrational excitation and relaxation of adsorbates at surfaces Peter Saalfrank (Universität Potsdam) EE/CS 3-180
11:10am-11:20am Discussion   EE/CS 3-180
11:20am-12:20pm Concluding discussion Dmitri Babikov (Marquette University) EE/CS 3-180
12:20pm-2:00pm Lunch    
2:00pm-2:45pm Overview talk: Advanced computing platforms offer a "microscope" for [simulating] conformational changes Tamar Schlick (New York University) EE/CS 3-180
2:45pm-3:00pm Discussion   EE/CS 3-180
3:00pm-3:30pm Single-sweep methods for free energy calculations Eric Vanden-Eijnden (New York University) EE/CS 3-180
3:30pm-3:40pm Discussion   EE/CS 3-180
3:40pm-4:30pm Coffee   EE/CS 3-176
4:30pm-5:00pm Rare event statistics in molecular dynamics Christof Schütte (Freie Universität Berlin) EE/CS 3-180
5:00pm-5:10pm Discussion   EE/CS 3-180
5:10pm-5:40pm Recent progress in conformational analysis Marcus Weber (Konrad-Zuse-Zentrum für Informationstechnik (ZIB)) EE/CS 3-180
5:40pm-5:50pm Discussion   EE/CS 3-180
5:50pm-6:15pm Concluding discussion Mark E. Tuckerman (New York University) EE/CS 3-180
6:15pm-7:15pm Reception   Lind Hall 400
  Wednesday, January 14
Morning Session Topic - "Non-Adiabatic Dynamics"
Chair – Jack Simons (University of Utah)

Afternoon Session Topic – "Semi-empirical and QM/MM Electronic Structure Theories for Direct Dynamics"
Chair – Oriol Vendrell-Romagosa (Ruprecht-Karls-Universität Heidelberg)

8:00am-8:30am Coffee   EE/CS 3-176
8:30am-9:15am Trajectory studies of gas/liquid reactions George C. Schatz (Northwestern University) EE/CS 3-180
9:15am-9:30am Discussion   EE/CS 3-180
9:30am-10:00am Nuclear-electronic orbital approach: Electron-proton correlation, multicomponent density functional theory, and tunneling splittings Sharon Hammes-Schiffer (Pennsylvania State University) EE/CS 3-180
10:00am-10:10am Discussion   EE/CS 3-180
10:10am-11:00am Coffee   EE/CS 3-176
11:00am-11:30am Path integral and semiclassical methods for quantum dynamics Nancy Makri (University of Illinois at Urbana-Champaign) EE/CS 3-180
11:30am-11:40am Discussion   EE/CS 3-180
11:40am-12:15pm Concluding discussion Millard Alexander (University of Maryland) EE/CS 3-180
12:15pm-2:00pm Lunch    
2:00pm-2:45pm Overview talk: Free energies of chemical reactions in solution and in enzymes with Ab initio quantum mechanics/molecular mechanics methods Weitao Yang (Duke University) EE/CS 3-180
2:45pm-3:00pm Discussion   EE/CS 3-180
3:00pm-3:30pm Surface hopping dynamics with direct semiempirical solution of the electronic problem Maurizio Persico (Università di Pisa) EE/CS 3-180
3:30pm-3:40pm Discussion   EE/CS 3-180
3:40pm-4:30pm Coffee   EE/CS 3-176
4:30pm-5:00pm Self consistent polarization electronic structure Gregory K. Schenter (Pacific Northwest National Laboratory) EE/CS 3-180
5:00pm-5:10pm Discussion   EE/CS 3-180
5:10pm-6:10pm Concluding discussion Gilles H. Peslherbe (Concordia University) EE/CS 3-180
  Thursday, January 15
Session Topic - "Condensed Phase and Macromolecule Chemical Dynamics"
Morning Chair: Roi Baer (Hebrew University)
Afternoon Chair – Donald G. Truhlar (University of Minnesota)
8:00am-8:30am Coffee   EE/CS 3-176
8:30am-9:15am Dynamics on the nanoscale: Time-domain ab initio studies of quantum dots and carbon nanotubes Oleg Prezhdo (University of Washington) EE/CS 3-180
9:15am-9:30am Discussion   EE/CS 3-180
9:30am-10:00am Optimizing efficiency in replica-exchange molecular dynamics and avoiding the traps of Langevin dynamics Adrian E. Roitberg (University of Florida) EE/CS 3-180
10:00am-10:10am Discussion   EE/CS 3-180
10:10am-11:00am Coffee   EE/CS 3-176
11:00am-11:30am Multilayer multiconfiguration time-dependent Hartree theory Haobin Wang (New Mexico State University) EE/CS 3-180
11:30am-11:40am Discussion   EE/CS 3-180
11:40am-12:10pm Dogmatic and pragmatic spirits in time-dependent density functional theory Roi Baer (Hebrew University) EE/CS 3-180
12:10pm-12:20pm Discussion   EE/CS 3-180
12:20pm-2:00pm Lunch    
2:00pm-2:30pm The X-Pol potential: an explicit polarization quantum mechanical force field for condensed phase and protein dynamics Jiali Gao (University of Minnesota) EE/CS 3-180
2:30pm-2:40pm Discussion   EE/CS 3-180
2:40pm-3:10pm Quantum dynamics of photoinduced processes in extended molecular systems Irene Burghardt (École Normale Supérieure) EE/CS 3-180
3:10pm-3:20pm Discussion   EE/CS 3-180
3:20pm-4:10pm Coffee   EE/CS 3-176
4:10pm-4:40pm Hybrid ab initio valence bond / molecular mechanics (VB/MM), a new method for calculating biochemical systems Avital Shurki (Hebrew University) EE/CS 3-180
4:40pm-4:50pm Discussion   EE/CS 3-180
4:50pm-5:50pm Concluding discussion Greg Scholes (University of Toronto) EE/CS 3-180
6:30pm-8:30pm Workshop dinner at Pagoda   Pagoda Restaurant
1417 4th St. SE
Minneapolis, MN
612-378-4710 
  Friday, January 16
Session Topic - "Semi-Classical and Mixed Classical/Quantum Dynamics"
Chair – Ahren Jasper (Sandia National Laboratories)
8:00am-8:30am Coffee   EE/CS 3-176
8:30am-9:15am Adiabatic perturbation theory and the time-dependent Born-Oppenheimer approximation Stefan Teufel (Eberhard-Karls-Universität Tübingen) EE/CS 3-180
9:15am-9:30am Discussion   EE/CS 3-180
9:30am-10:00am Stable long-time semiclassical description of zero-point energy in high-dimensional molecular systems Vitaly Rassolov (University of South Carolina) EE/CS 3-180
10:00am-10:10am Discussion   EE/CS 3-180
10:10am-11:00am Coffee   EE/CS 3-176
11:00am-11:30am The time-dependent Born-Oppenheimer approximation, crossings, and avoided crossings George A. Hagedorn (Virginia Polytechnic Institute and State University) EE/CS 3-180
11:30am-11:40am Discussion   EE/CS 3-180
11:40am-12:10pm Well defined and accurate semiclassical surface hopping propagators and wave functions Michael F. Herman (Tulane University) EE/CS 3-180
12:10pm-12:20pm Discussion   EE/CS 3-180
12:20pm-1:20pm Concluding discussion David F. Coker (Boston University) EE/CS 3-180

LIST OF CONFIRMED PARTICIPANTS

NameDepartmentAffiliation
James Haley AdlerApplied Mathematics Department University of Colorado
Millard AlexanderDepartment of Chemistry and Biochemistry University of Maryland
Dmitri BabikovChemistry Department Marquette University
Roi BaerDepartment of Chemistry Hebrew University
George L. BarnesDepartment of Chemistry and Biochemistry Texas Tech University
Sergio BlanesInstitute of Mathematics Multidisciplinary Polytechnical University of Valencia
Sara BonellaDepartment of Physics Università di Roma "La Sapienza"
Joel M. BowmanDepartment of Chemistry Emory University
Bastiaan J. BraamsChemistry Department Emory University
Peter BruneDepartment of Computer Science University of Chicago
Irene BurghardtDepartment of Chemistry École Normale Supérieure
Maria-Carme T. CaldererSchool of Mathematics University of Minnesota
Hannah CallenderInstitute for Mathematics and its Applications University of Minnesota
Alessandro CembranDepartment of Chemistry University of Minnesota
Santanu ChaudhuriApplied Sciences Laboratory Washington State University
Xianjin ChenInstitute for Mathematics and its Applications University of Minnesota
David F. CokerDepartment of Chemistry Boston University
Ludovica Cecilia Cotta-RamusinoDepartment of Mathematics Institut National de la Recherche Agronomique (INRA)
Daniel DixDepartment of Mathematics University of South Carolina
Olivier DuboisInstitute for Mathematics and its Applications University of Minnesota
József Z. FarkasDepartment of Computing Science & Mathematics University of Stirling
Christopher FraserDepartment of Computer Science University of Chicago
Laura GagliardiDepartment of Chemistry University of Minnesota
Jiali GaoDepartment of Chemistry University of Minnesota
Sophya GarashchukDepartment of Chemistry and Biochemistry University of South Carolina
Jay GopalakrishnanDepartment of Mathematics University of Florida
Arseni GoussevDepartment of Mathematics University of Bristol
Vasile Catrinel GradinaruDepartment of Mathematics Eidgenössische TH Zürich-Zentrum
Francesca GuerraDepartment of Chemistry University of Minnesota
Hua GuoDepartment of Chemistry University of New Mexico
George A. HagedornMathematics Department Virginia Polytechnic Institute and State University
Sharon Hammes-SchifferDepartment of Chemistry Pennsylvania State University
Jaebeom HanDepartment of Chemistry University of Minnesota
William L. HaseDepartment of Chemistry and Biochemistry Texas Tech University
John M. HerbertDepartment of Chemistry Ohio State University
Mark S. HermanInstitute for Mathematics and its Applications University of Minnesota
Michael F. HermanDepartment of Chemistry Tulane University
Peter HinowInstitute for Mathematics and its Applications University of Minnesota
Hao HuDepartment of Chemistry Duke University
Xiangqian HuDepartment of Chemistry Duke University
Jingfang HuangDepartment of Mathematics University of North Carolina
Yunkyong HyonInstitute for Mathematics and its Applications University of Minnesota
Francesca IngrossoEquipe de Chimie et Biochimie Théoriques  Université de Nancy I (Henri Poincaré)
Mark IwenInstitute for Mathematics and its Applications University of Minnesota
Alexander IzzoDepartment of Mathematics and Statistics Bowling Green State University
Leif David JacobsonDepartment of Chemistry Ohio State University
Ahren JasperCombustion Research Facility Sandia National Laboratories
Srividhya JeyaramanInstitute for Mathematics and its Applications University of Minnesota
Lijian JiangInstitute for Mathematics and its Applications University of Minnesota
Claude Le BrisEcole Nationale des Ponts et Chaussées (ENPC) CERMICS
Chiun-Chang LeeDepartment of Mathematics National Taiwan University
Yongfeng LiInstitute for Mathematics and its Applications University of Minnesota
Pinsker Lin University of Minnesota
Tai-Chia LinDepartment of Mathematics National Taiwan University
Chun LiuInstitute for Mathematics and its Applications University of Minnesota
Christian LubichMathematisches Institut Eberhard-Karls-Universität Tübingen
Russell LukeDepartment of Mathematical Sciences University of Delaware
Daniel James LundbergDepartment of Chemistry and Physics Gallaudet University
Mitchell LuskinSchool of Mathematics University of Minnesota
Nancy MakriDepartment of Chemistry University of Illinois at Urbana-Champaign
Bhabani Shankar MallikDepartment of Chemistry University of Minnesota
David E. ManolopoulosDepartment of Physical and Theoretical Chemistry University of Oxford
Vasileios MaroulasInstitute for Mathematics and its Applications University of Minnesota
David J. MasielloDepartment of Chemistry Northwestern University
Anne B. McCoyDepartment of Chemistry Ohio State University
Kevin W. MclaughlinDepartment of Chemistry University of Wisconsin - River Falls
Hans-Dieter MeyerDepartment of Chemistry Ruprecht-Karls-Universität Heidelberg
Craig MichoskiDepartment of Chemistry and Biochemistry University of Texas
Steven L. MielkeDepartment of Chemistry University of Minnesota
Jorge Alberto MoralesDepartment of Chemistry and Biochemistry Texas Tech University
Junalyn Navarra-MadsenDepartment of Mathematics and Computer Science Texas Woman's University
Isamu OnishiDepartment of Mathematical and Life Sciences Hiroshima University
Maurizio PersicoDipartimento di Chimica e Chimica Industriale Università di Pisa
Gilles H. PeslherbeDepartment of Chemistry and Biochemistry Concordia University
Bill PoirierDepartment of Chemistry and Biochemistry Texas Tech University
Oleg PrezhdoDepartment of Chemistry University of Washington
Neeraj RaiDepartment of Chemistry University of Minnesota
Vitaly RassolovDepartment of Chemistry and Biochemistry University of South Carolina
Melissa ReevesDepartment of Chemistry Tuskegee University
Adrian E. RoitbergDepartment of Chemistry University of Florida
Peter SaalfrankInstitute of Chemistry Universität Potsdam
Fadil SantosaInstitute for Mathematics and its Applications University of Minnesota
George C. SchatzChemistry Department Northwestern University
Arnd ScheelSchool of Mathematics University of Minnesota
Gregory K. SchenterEnviromental Molecular Sciences Laboratory Pacific Northwest National Laboratory
Reinhard Schinke Max-Planck-Institut für Dynamik und Selbstorganisation
Tamar SchlickCourant Institute of Mathematical Sciences New York University
Greg ScholesDepartment of Chemistry University of Toronto
Roman SchubertDepartment of Mathematics University of Bristol
Christof SchütteDepartment of Mathematics and Computer Science Freie Universität Berlin
Igor V. SchweigertDepartment of Theoretical Chemistry Section Naval Research Laboratory
L. Ridgway ScottDepartment of Computer Science University of Chicago
Tsvetanka SendovaInstitute for Mathematics and its Applications University of Minnesota
Yuk ShamCenter for Drug Design University of Minnesota
Avital ShurkiDepartment of Medicinal Chemistry and Natural Products Hebrew University
Heinz SiedentopMathematisches Institut Ludwig-Maximilians-Universität München
Jack SimonsDepartment of Chemistry University of Utah
Andrew M. SteinInstitute for Mathematics and its Applications University of Minnesota
Joseph Eli SubotnikChemistry Department Tel Aviv University
David J. TannorDepartment of Chemical Physics Weizmann Institute of Science
Andrew G TaubeMultiscale Dynamic Materials Modeling Department Sandia National Laboratories
Stefan TeufelMathematical Institute Eberhard-Karls-Universität Tübingen
Donald L. Thompson University of Missouri
Sana Tishchenko University of Minnesota
Saber TrabelsiFak. of Mathematics, University of Vienna (Austria) Universität Wien
Donald G. TruhlarSupercomputer Institute and Department of Chemistry University of Minnesota
Mark E. TuckermanDepartment of Chemistry New York University
Erkan TüzelInstitute for Mathematics and its Applications University of Minnesota
Rosendo ValeroDepartment of Chemistry University of Minnesota
Steven M. ValoneMaterial Science and Technology Division  Los Alamos National Laboratory
Eric Vanden-EijndenCourant Institute of Mathematical Sciences New York University
Oriol Vendrell-RomagosaTheoretische Chemie Ruprecht-Karls-Universität Heidelberg
Haobin WangDepartment of Chemistry New Mexico State University
Zhian WangInstitute for Mathematics and its Applications University of Minnesota
Marcus WeberNumerical Analysis and Modelling Department Konrad-Zuse-Zentrum für Informationstechnik (ZIB)
Stephen WigginsSchool of Mathematics University of Bristol
Kin-Yiu Wong University of Minnesota
Wei XiongInstitute for Mathematics and its Applications University of Minnesota
Weitao YangDepartment of Chemistry Duke University
Yuncheng YouDepartment of Mathematics University of South Florida
Xiancheng Zeng Duke University
Lei ZhangDepartment of Mathematics Pennsylvania State University
Weigang ZhongInstitute for Mathematics and its Applications University of Minnesota
Yu ZhuangDepartment of Computer Science Texas Tech University