umn logo IMA home |  Contact IMA 
IMA Web

IMA Annual Program Year Workshop

Development and Analysis of Multiscale Methods

November 3-7, 2008
Organizers:
Frank L. H. Brown Chemistry and Biochemistry, University of California
Anne M. Chaka Physical and Chemical Properties, National Institute of Standards and Technology
Gero Friesecke Mathematics, Technische Universität München
Kurt Kremer Max-Planck Institut für Polymerforschung
Yousef Saad Computer Science and Engineering, University of Minnesota

Schedule Participants Program Application Feedback
IMA Live Streaming and Webcasting Maps
Abstracts and Talk Materials Dining Guide

Description:

Theoretical, computational and experimental approaches to problems in natural sciences typically focus on particular aspects of the studied phenomena or systems. This is linked to the need to structure the questions with respect to the most relevant length and time scales. This need comes from the limited range of applicability of specific experimental as well as theoretical tools. In the past this has created huge progress and is the basis of our current understanding of physical, chemical and biological systems. For example, in the area of phase transitions and critical phenomena renormalization group theory has shown that many properties such as critical exponents or ratio of critical amplitudes does not depend on microscopic details of the studied system. This means that within each universality class, for many properties it is sufficient to study highly idealized model systems. However details of the models determine the transition temperature or the absolute amplitudes. Similar examples could be given in many other areas, for example the mechanical response of bulk solids, thin films or biological membranes are to a large extent governed by a small number of universal models but constitutive parameters depend crucially on the details of the underlying microstructure. In a computer simulation, in principle it would be possible to study systems on huge length scales and for long times (i.e. fracture mechanics based on an all atom simulation, function of a membrane protein in a fully fluctuating membrane etc.) if all the interactions would be fully treated and infinite CPU time would be available. While neither of the two is the case, such an ansatz probably also would produce too much information, obscuring a more general understanding.

Out of this, for several years now scale bridging or multiscale simulations methods are developed at many places. They are still in their infancy and the many different ideas did not converge into one or several generally accepted and validated schemes. Because of that, this fairly young and critical area of computational science can benefit greatly from advances in mathematics. Conversely, emerging computational experience on truly multiscale systems can serve as a great stimulus to mathematical understanding, which at present remains at its most thorough for two-scale systems (as treated, e.g., in classical and stochastic homogenization theory or Gamma-convergence).

Examples of truly multiscale systems include biological ion channels, proteins, emulsions, functional materials and quantum dots. They require new methods to address challenges such as hierarchies of structual organisation, fluctuating (electrostatic) fields, simultaneous treatment and interdependencies of very short and very long range interactions, and approximate Hamiltonians to model dynamics and reactivity of tens of thousands of atoms. In order to achieve this coupling schemes between different scales have to be developed which includes systematic coarse graining strategies, appropriate interaction potentials and force fields, and methods to link studies on different scales and tune the resolution of the computer model to coarser and finer resolution as needed. Ultimately such schemes have to include classical as well as quantum methods. All this requires new approaches beyond conventional computer modeling.

The workshop aims to address a number of exemplary questions. How does one parameterize coarse grained interaction potentials for bonded and nonbonded interactions? The latter is especially delicate for soft matter, because of the huge size of the molecules. What is the best point or regime in parameter and phase space to hand over from one to another level of description? How do errors propagate from one level to the next and what are the consequences when one wants to finegrain again? How specific or transferable are models and methods or are there general strategies to follow? Do we have strategies and general criteria for validation beyond trivial tests? Coarse graining means mapping of scales, but how does this work for nonequilibrium systems and time scales, i.e., for studying dynamics? All these questions will be addressed and discussed in terms of basic concepts as well as specific applications.

Preliminary Schedule
Monday | Tuesday | Wednesday | Thursday | Friday | 
  Monday, November 3
Multiscale modeling in soft and biological matter, I
8:15a-9:00a Registration and coffee   EE/CS 3-176
9:00a-9:15a Welcome to the IMA Fadil Santosa (University of Minnesota) EE/CS 3-180
9:15a-10:00a TBA Berend Smit (University of California, Berkeley) EE/CS 3-180
10:00a-10:30a Coffee   EE/CS 3-176
10:30a-11:15a TBA Mikko Karttunen (University of Western Ontario) EE/CS 3-180
11:15a-12:00p TBA Markus Deserno (Carnegie Mellon University) EE/CS 3-180
12:00p-2:00p Lunch    
2:00p-2:45p Soft coarse-grained models for multicomponent polymer melts: free energy and single-chain dynamics Marcus Müller (Georg-August-Universität zu Göttingen) EE/CS 3-180
2:45p-3:30p Simple models for biomembrane structure and dynamics Frank L. H. Brown (University of California, Santa Barbara) EE/CS 3-180
3:30p-3:45p Group Photo    
3:45p-4:15p Coffee   EE/CS 3-176
4:15p-4:45p Second chances   EE/CS 3-180
5:00p-6:30p Reception and Poster Session
Poster submissions welcome from all participants
Lind Hall 400
Force matching versus structural coarse-graining Alexander Lukyanov (Max-Planck Institut für Polymerforschung)
  Tuesday, November 4
Molecular dynamics
8:30a-9:15a Coffee   EE/CS 3-176
9:15a-10:00a TBA Teresa Head-Gordon (University of California, Berkeley) EE/CS 3-180
10:00a-10:30a Coffee   EE/CS 3-176
10:30a-11:15a TBA Richard D. James (University of Minnesota) EE/CS 3-180
11:15a-12:00p TBA Burkhard Dünweg (Max-Planck Institut für Polymerforschung) EE/CS 3-180
12:00p-2:00p Lunch    
2:00p-2:45p Multiscale modeling and simulation of soft matter materials Paul J. Atzberger (University of California, Santa Barbara) EE/CS 3-180
2:45p-3:30p Soft potentials for coarse grained modeling Ignacio Pagonabarraga Mora (University of Barcelona) EE/CS 3-180
3:30p-4:00p Coffee   EE/CS 3-176
4:00p-4:30p Second chances   EE/CS 3-180
  Wednesday, November 5
Mathematical aspects of scale-bridging
8:30a-9:15a Coffee   EE/CS 3-176
9:15a-10:00a TBA Weinan E (Princeton University) EE/CS 3-180
10:00a-10:30a Coffee   EE/CS 3-176
10:30a-11:15a TBA Eric Vanden-Eijnden (New York University) EE/CS 3-180
11:15a-12:00p TBA   EE/CS 3-180
12:00p-2:00p IMA Special Lunch    
2:00p-2:45p Variational coarse-graining of lattice systems Andrea Braides (Seconda Università di Roma "Tor Vergata") EE/CS 3-180
2:45p-3:30p TBA Claude Le Bris (CERMICS) EE/CS 3-180
3:30p-4:00p Coffee   EE/CS 3-176
4:00p-4:30p Second chances   EE/CS 3-180
  Thursday, November 6
Multiscale modeling in soft and biological matter, II
8:15a-8:45a Coffee   EE/CS 3-176
8:45a-9:30a TBA Cecilia Clementi (Rice University) EE/CS 3-180
9:30a-9:45a Grab a glass of coffee then proceed immediately to 331 Smith Hall for the 9:45am Moscowitz Lecture   EE/CS 3-176
9:45a-10:45a Michael Frisch Moscowitz Lecture (Chemistry Department)
author of the widely used Gaussian computer program (for electronic structure calculations (including some multiscale algorithms) and the President of Gaussian, Inc.]
  331 Smith Hall 
11:00a-11:45a A rigorous multiscale bridge connecting atomistic and coarse-grained models William G. Noid (Pennsylvania State University) EE/CS 3-180
11:45a-12:30p Unveiling conformational changes of biological molecules using multiscale modeling and multiresolution experiments Florence Tama (University of Arizona) EE/CS 3-180
12:30p-2:00p Lunch    
2:00p-2:45p Multi-scale modeling of DNA Wilma K. Olson (Rutgers University) EE/CS 3-180
2:45p-3:30p TBA Raymond Kapral (University of Toronto) EE/CS 3-180
3:30p-4:00p Coffee   EE/CS 3-176
4:00p-4:45p TBA Gerhard Hummer (National Institutes of Health (NIH)) EE/CS 3-180
4:45p-5:15p Second chances   EE/CS 3-180
7:00p-8:30p Conference Dinner   TBA 
  Friday, November 7
Algorithmic aspects of scale-bridging
8:30a-9:15a Coffee   EE/CS 3-176
9:15a-10:00a The adaptive resolution simulation scheme (AdResS): Basic principles and applications Luigi Delle Site (Max-Planck Institut für Polymerforschung) EE/CS 3-180
10:00a-10:30a Coffee   EE/CS 3-176
10:30a-11:15a Atomistic, mesoscopic and continuum hydrodynamics: coupling liquid models with different resolution Rafael Delgado-Buscalioni (Autonomous University of Madrid) EE/CS 3-180
11:15a-12:00p TBA Mitchell Luskin (University of Minnesota) EE/CS 3-180
12:00p-12:30p Second chances and closing remark   EE/CS 3-180

LIST OF CONFIRMED PARTICIPANTS

Name Department Affiliation
Cameron F. Abrams Department of Chemicial Engineering Drexel University
Denis Andrienko Polymer Theory Group Max-Planck Institut für Polymerforschung
Paul J. Atzberger Department of Mathematics University of California, Santa Barbara
Marian Bocea Department of Mathematics North Dakota State University
Nawaf Bou-Rabee Department of Applied and Computational Mathematics California Institute of Technology
Bastiaan J. Braams Chemistry Department Emory University
Andrea Braides Dipartimento di Matematica Seconda Università di Roma "Tor Vergata"
Frank L. H. Brown Department of Chemistry and Biochemistry University of California, Santa Barbara
Peter Brune Department of Computer Science University of Chicago
Maria-Carme T. Calderer School of Mathematics University of Minnesota
Hannah Callender Institute for Mathematics and its Applications University of Minnesota
Roberto Cammi Facoltà di Scienze Università di Parma
Eric Cances ENPC CERMICS
Anne M. Chaka   National Institute of Standards and Technology
Xianjin Chen Institute for Mathematics and its Applications University of Minnesota
Daniel M. Chipman Radiation Laboratory University of Notre Dame
Jhih-Wei Chu Department of Chemical Engineering University of California, Berkeley
Marco Cicalese Department of Mathematics and Its Applications Università di Napoli "Federico II"
Cecilia Clementi Department of Chemistry Rice University
Ludovica Cecilia Cotta-Ramusino Institute for Mathematics and its Applications University of Minnesota
Olivier Coulaud   Institut National de Recherche en Informatique Automatique (INRIA)
Rafael Delgado-Buscalioni Departamento de Fisica Teorica de la Materia Condensada Autonomous University of Madrid
Luigi Delle Site   Max-Planck Institut für Polymerforschung
Markus Deserno Department of Physics Carnegie Mellon University
Masao Doi Department of Applied Physics University of Tokyo
Olivier Dubois Institute for Mathematics and its Applications University of Minnesota
Burkhard Dünweg   Max-Planck Institut für Polymerforschung
Weinan E Department of Mathematics and Applied Computational Mathematics Princeton University
Bob Eisenberg Department of Molecular Biophysics and Physiology Rush University Medical Center
Bjorn Engquist Department of Mathematics University of Texas
Maria Esteban Ceremade Université de Paris IX (Paris-Dauphine)
James W. Evans Department of Mathematics Iowa State University
Roland Faller Department of Chemical Engineering and Materials Science University of California, Davis
Daniel Flath Department of Mathematics and Computer Science Macalester College
Christopher Fraser Department of Computer Science University of Chicago
Gero Friesecke Center for Mathematics Technical University of Munich
Dominik Fritz Polymer Theory Group Max Planck Institute for Polymer Research
Weiguo Gao   Fudan University
Carlos J. Garcia-Cervera Department of Mathematics University of California, Santa Barbara
Johannes Giannoulis Zentrum Mathematik Technical University of Munich
Stefan Goedecker Department of Physics and Astronomy Universität Basel
Jay Gopalakrishnan Department of Mathematics University of Florida
Murthy N. Guddati Department of Civil Engineering North Carolina State University
Carsten Hartmann Institut für Mathematik Freie Universität Berlin
Timothy F. Havel Sloan School of Management Massachusetts Institute of Technology
Teresa Head-Gordon Bioengineering Department University of California, Berkeley
Mark S. Herman Institute for Mathematics and its Applications University of Minnesota
Peter Hinow Institute for Mathematics and its Applications University of Minnesota
Gerhard Hummer Laboratory of Chemical Physics National Institutes of Health (NIH)
Yunkyong Hyon Institute for Mathematics and its Applications University of Minnesota
Mark Iwen Institute for Mathematics and its Applications University of Minnesota
Alexander Izzo Department of Mathematics and Statistics Bowling Green State University
Richard D. James Department of Aerospace Engineering and Mechanics University of Minnesota
Robert L. Jernigan Baker Ctr for Bioinformatics and Biological Statistics Iowa State University
Srividhya Jeyaraman Institute for Mathematics and its Applications University of Minnesota
Lijian Jiang Institute for Mathematics and its Applications University of Minnesota
Sookyung Joo Department of Applied Mathematics University of California, Santa Barbara
Christoph Junghans Polymer Theory Group Max-Planck Institut für Polymerforschung
Raymond Kapral Department of Chemistry University of Toronto
Mikko Karttunen Department of Applied Mathematics University of Western Ontario
Toshihiro Kawakatsu Department of Physics Tohoku University
Markus Keel School of Mathematics University of Minnesota
William S. Klug Department of Mechanical and Aerospace Engineering University of California, Los Angeles
Robert V. Kohn Courant Institute of Mathematical Sciences New York University
Kurt Kremer   Max-Planck Institut für Polymerforschung
Anna Krylov Department of Chemistry University of Southern California
Monica H. Lamm Chemical & Biological Engineering Department Iowa State University
Yueheng Lan Department of Mechanical Engineering University of California, Santa Barbara
Claude Le Bris   CERMICS
Chiun-Chang Lee Department of Mathematics National Taiwan University
Hijin Lee Mathematics Department Korea Advanced Institute of Science and Technology (KAIST)
Frédéric Legoll LAMI École Nationale des Ponts-et-Chaussées
Bo Li Department of Mathematics University of California, San Diego
Tong Li Department of Mathematics University of Iowa
Yongfeng Li Institute for Mathematics and its Applications University of Minnesota
Tai-Chia Lin Department of Mathematics National Taiwan University
Chun Liu   University of Minnesota
Alexander Lukyanov Institute for Polymer Research Max-Planck Institut für Polymerforschung
Mitchell Luskin School of Mathematics University of Minnesota
Dionisios Margetis Department of Mathematics University of Maryland
Vasileios Maroulas Institute for Mathematics and its Applications University of Minnesota
Jesus Martin-Vaquero Departamento de Matematica Aplicada University of Salamanca
Marcus Müller Institut für Theoretische Physik Georg-August-Universität zu Göttingen
Olalla Nieto Faza Department of Chemistry University of Minnesota
William G. Noid Department of Chemistry Pennsylvania State University
Wilma K. Olson Department of Chemistry and Chemical Biology Rutgers University
Ignacio Pagonabarraga Mora Departament de Física Fonamental University of Barcelona
Stephen D Pankavich Department of Mathematics Indiana University
Grigorios A. Pavliotis Department of Mathematics Imperial College London
Simon Poblete Polymer Theory Group Max Planck Institute for Polymer Research
Cristina Popovici Department of Mathematics North Dakota State University
Matej Praprotnik Theory Group Max Planck Institute for Polymer Research
Keith Promislow Department of Mathematics Michigan State University
Weiqing Ren Courant Institute of Mathematical Sciences New York University
Mark O. Robbins Department of Physics and Astronomy Johns Hopkins University
Victor Rühle   Max Planck Institute for Polymer Research
Yousef Saad Department of Computer Science University of Minnesota
Fadil Santosa School of Mathematics University of Minnesota
Garikapati Narahari Sastry Molecular Modeling Group Indian Institute of Chemical Technology
Arnd Scheel School of Mathematics University of Minnesota
Roman Schubert Department of Mathematics University of Bristol
Christof Schütte Department of Mathematics and Computer Science Freie Universität Berlin
Ridgway Scott Department of Computer Science University of Chicago
Tsvetanka Sendova Institute for Mathematics and its Applications University of Minnesota
Yuk Sham Center for Drug Design University of Minnesota
Heinz Siedentop Mathematisches Institut Ludwig-Maximilians-Universität München
Lyubima Simeonova Department of Mathematics University of Utah
Berend Smit Department of Chemical Engineering University of California, Berkeley
Valery P. Smyshlyaev   University of Bath
Andrew M. Stein IMA University of Minnesota
John M. Stockie Department of Mathematics Simon Fraser University
Bo Su Department of Mathematics Iowa State University
Ellad B Tadmor Department of Aersospace Engineering and Mechanics (AEM) University of Minnesota
Florence Tama Department of Biochemistry & Molecular Biophysics University of Arizona
Molei Tao Department of Control and Dynamical Systems California Institute of Technology
Alex Travesset Department of Physics and Astronomy Iowa State University
Donald G. Truhlar Supercomputer Institute and Department of Chemistry University of Minnesota
Erkan Tüzel Institute for Mathematics and its Applications University of Minnesota
Steven M. Valone Material Science and Technology Division Los Alamos National Laboratory
Eric Vanden-Eijnden Courant Institute of Mathematical Sciences New York University
Mavrantzas George Vlasis Department of Chemical Engineering University of Patras
Bruce Wade Department of Mathematical Sciences University of Wisconsin
Zhian Wang IMA University of Minnesota
Zhongming Wang Department of Mathematics University of California, San Diego
Dexuan Xie Department of Mathematical Sciences University of Wisconsin
Wei Xiong Institute for Mathematics and its Applications University of Minnesota
Chao Yang Computational Research Division Lawrence Berkeley National Laboratory
Aaron Nung Kwan Yip Department of Mathematics Purdue University
Haijun Yu Department of Mathematics Purdue University
Jin Yu Department of Physics University of California, Berkeley
Weigang Zhong Institute for Mathematics and its Applications University of Minnesota